Example of uses

Release notes & Stats



Related links


Citation of dbRIP: Wang J, Song L, Grover D, Azrak S, Batzer MA, Liang P. dbRIP: a highly integrated database of retrotransposon insertion polymorphisms in humans.Hum Mutat 27(4):323-329, 2006; PMID: 16511833; PDF file.

Papers Citating dbRIP (a more update list is available at Google Scholar):

  • Wang J, Song L, Gonder MK, Azrak S, Ray DA, Batzer MA, Tishkoff SA, Liang P. Whole genome computational comparative genomics: a fruitful approach for ascertaining Alu insertion polymorphisms. Gene 365:11-20, 2006.
  • Khaja R, Zhang J, MacDonald JR, He Y, Joseph-George AM, Wei J, Rafiq MA, Qian C, Shago M, Pantano L, Aburatani H, Jones K, Redon R, Hurles M, Armengol L, Estivill X, Mural RJ, Lee C, Scherer SW, Feuk L. Genome assembly comparison identifies structural variants in the human genome. Nat Gen 38:1413-1418, 2006.
  • Lindsay SJ, Khajavi M, Lupski JR, Hurles ME. A Chromosomal Rearrangement Hotspot Can Be IdentifiedA Chromosomal Rearrangement Hotspot Can Be Identified from Population Genetic Variation and Is Coincident with a Hotspot for Allelic Recombination. Am J Hum Gen 79:890-902, 2006.
  • Konkel M*, Wang J*, Liang P, Batzer MA. Identification and characterization of novel polymorphic LINE-1 insertions through comparison of two human genome sequence assemblies. Gene 390:18-27, 2007.
  • Lee, J, Cordaux R, Han K, Wang J, Hedges DJ, Batzer MA*, Liang P*. Different evolutionary fates of recently integrated human and chimpanzee LINE-1 retrotransposons. Gene 390:28-38, 2007.
  • Chen J, Ferec C, Cooper DN. Mechanism of Alu Integration into the human genome. Genomic Med (advanced online publication on March 28, 2007).
  • Mills RE, Bennett EA, Iskow RC, Devine SE. Which transposable elements are active in the human genome? Trends Genet 23:183-191, 2007.
  • Witherspoon DJ, Marchani EE, Watkins WS, Ostler CT, Wooding SP, Anders BA,Fowlkes JD, Boissinot S, Furano AV, Ray DA, Rogers AR, Batzer MA, Jorde LB. Human population genetic structure and diversity inferred from polymorphic L1(LINE-1) and Alu insertions. Hum Hered 2006;62(1):30-46. Epub 2006 Sep 21.
  • Levy S, Sutton G, Ng PC, Feuk L, Halpern AL, et al. The Diploid Genome Sequence of an Individual Human. PLoS Biol 5: e254, 2007. doi:10.1371/journal.pbio.0050254.

Last modified:Thursday, 07-May-2015 00:07:45 EDT .